RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g07490.1 View Network Show in Genome Browser |
| Other Names | Os11g0176100 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 3795981-3801208 Nucleotide Length: 1488 |
| Protein-coding | LOC_Os11g07490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0040007 | growth | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g48230 LOC_Os10g39620 LOC_Os03g13760 LOC_Os02g01250 LOC_Os03g38960 LOC_Os09g20590 LOC_Os03g44484 LOC_Os01g59140 LOC_Os10g31900 LOC_Os02g12570 LOC_Os01g34614 More.. |
| Downstream Genes | LOC_Os11g08940 LOC_Os12g38380 LOC_Os12g37370 LOC_Os11g41820 LOC_Os12g44390 LOC_Os11g43620 LOC_Os12g18880 LOC_Os11g45590 LOC_Os11g14430 LOC_Os11g41890 LOC_Os12g43600 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g07490.1 |
| Rice Genome Annotation | LOC_Os11g07490.1 |
| Ricechip | LOC_Os11g07490.1 |
| KEGG | osa:4349923 dosa:Os11t0176100-01 |
| Entrez-Gene | 4349923 |