RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g07916.1 View Network Show in Genome Browser |
| Other Names | Os11g0181500 |
| Description | nifU, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 4086132-4090752 Nucleotide Length: 687 |
| Protein-coding | LOC_Os11g07916 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54020 LOC_Os08g05490 LOC_Os03g14370 LOC_Os03g51990 LOC_Os08g42100 LOC_Os03g40100 LOC_Os03g29980 LOC_Os04g32110 LOC_Os08g42080 LOC_Os08g23110 LOC_Os02g34990 More.. |
| Downstream Genes | LOC_Os12g05650 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g07916.1 |
| Rice Genome Annotation | LOC_Os11g07916.1 |
| Ricechip | LOC_Os11g07916.1 |
| KEGG | osa:4349942 dosa:Os11t0181500-01 |
| Entrez-Gene | 4349942 |