RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g08300.3 View Network Show in Genome Browser |
| Other Names | Os11g0186200 |
| Description | aldehyde dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 4375281-4380044 Nucleotide Length: 966 |
| Protein-coding | LOC_Os11g08300 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g52860 LOC_Os06g05660 LOC_Os07g29620 LOC_Os02g10070 LOC_Os01g40280 LOC_Os09g38030 LOC_Os06g10810 LOC_Os05g44210 LOC_Os02g41550 LOC_Os04g57790 LOC_Os07g44430 More.. |
| Downstream Genes | LOC_Os11g33240 LOC_Os12g01160 LOC_Os12g10580 LOC_Os12g34550 LOC_Os11g47760 LOC_Os12g43740 LOC_Os12g07110 LOC_Os11g17610 LOC_Os12g43664 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g08300.3 |
| Rice Genome Annotation | LOC_Os11g08300.3 |
| Ricechip | LOC_Os11g08300.3 |
| KEGG | osa:4349966 dosa:Os11t0186200-01 |
| Entrez-Gene | 4349966 |