RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g08670.1 View Network Show in Genome Browser |
| Other Names | Os11g0191400 |
| Description | NAD kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 4614156-4622265 Nucleotide Length: 2946 |
| Protein-coding | LOC_Os11g08670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g03370 LOC_Os09g11250 LOC_Os08g25090 LOC_Os05g37700 LOC_Os02g39870 LOC_Os04g35180 LOC_Os01g56560 LOC_Os03g05806 LOC_Os01g68330 LOC_Os06g48510 LOC_Os01g12810 More.. |
| Downstream Genes | LOC_Os11g14230 LOC_Os12g02350 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1439 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00760 rn01100 |
| Metacyc Pathways | PWY-5083 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g08670.1 |
| Rice Genome Annotation | LOC_Os11g08670.1 |
| Ricechip | LOC_Os11g08670.1 |
| KEGG | osa:4349979 dosa:Os11t0191400-01 |
| Entrez-Gene | 4349979 |