RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g08980.1 View Network Show in Genome Browser |
| Other Names | Os11g0195100 |
| Description | preprotein translocase secA family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 4760804-4761136 Nucleotide Length: 3291 |
| Protein-coding | LOC_Os11g08980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g63950 LOC_Os03g17120 LOC_Os06g44370 LOC_Os03g43890 LOC_Os02g14790 LOC_Os11g03990 LOC_Os01g51300 LOC_Os02g18820 LOC_Os03g03150 LOC_Os02g47180 LOC_Os01g74146 More.. |
| Downstream Genes | LOC_Os12g03822 LOC_Os12g10200 LOC_Os11g43530 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g08980.1 |
| Rice Genome Annotation | LOC_Os11g08980.1 |
| Ricechip | LOC_Os11g08980.1 |
| KEGG | osa:4349987 dosa:Os11t0195100-00 |
| Entrez-Gene | 4349987 |