RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g09310.1 View Network Show in Genome Browser |
| Other Names | Os11g0199600 |
| Description | zinc finger CCHC domain-containing protein 10, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 4982734-4988296 Nucleotide Length: 822 |
| Protein-coding | LOC_Os11g09310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g05710 LOC_Os05g01550 LOC_Os02g16880 LOC_Os11g01170 LOC_Os08g22354 LOC_Os04g56730 LOC_Os02g14730 LOC_Os05g05700 LOC_Os01g43580 |
| Downstream Genes | LOC_Os12g01170 LOC_Os11g34300 LOC_Os11g14420 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g09310.1 |
| Rice Genome Annotation | LOC_Os11g09310.1 |
| Ricechip | LOC_Os11g09310.1 |
| KEGG | osa:4350003 dosa:Os11t0199600-02 |
| Entrez-Gene | 4350003 |