RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g10060.1 View Network Show in Genome Browser |
| Other Names | Os11g0207000 |
| Description | transcriptional corepressor SEUSS, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 5378424-5383906 Nucleotide Length: 3234 |
| Protein-coding | LOC_Os11g10060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g32948 LOC_Os08g41950 LOC_Os07g01820 LOC_Os03g54160 LOC_Os01g42260 |
| Downstream Genes | LOC_Os11g10070 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR172d-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g10060.1 |
| Rice Genome Annotation | LOC_Os11g10060.1 |
| Ricechip | LOC_Os11g10060.1 |
| KEGG | osa:4350031 dosa:Os11t0207000-01 |
| Entrez-Gene | 4350031 |