RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g11060.1 View Network Show in Genome Browser |
| Other Names | Os11g0217300 |
| Description | GHMP kinases ATP-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 6101180-6105639 Nucleotide Length: 1062 |
| Protein-coding | LOC_Os11g11060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g55890 LOC_Os07g27930 LOC_Os03g38960 LOC_Os11g08940 LOC_Os08g32990 LOC_Os03g54860 LOC_Os07g42450 LOC_Os03g08440 LOC_Os05g24580 LOC_Os08g20270 LOC_Os11g03400 More.. |
| Downstream Genes | LOC_Os12g07980 LOC_Os12g03090 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00052 rn00520 rn01100 rn01110 |
| Metacyc Pathways | PWY-3821 GALACTMETAB-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g11060.1 |
| Rice Genome Annotation | LOC_Os11g11060.1 |
| Ricechip | LOC_Os11g11060.1 |
| KEGG | osa:4350084 dosa:Os11t0217300-01 |
| Entrez-Gene | 4350084 |