RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g11210.1 View Network Show in Genome Browser |
| Other Names | Os11g0219000 |
| Description | OsClp12 - Putative Clp protease homologue, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 6195694-6197744 Nucleotide Length: 843 |
| Protein-coding | LOC_Os11g11210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g12150 LOC_Os03g22950 LOC_Os08g43580 LOC_Os09g36860 |
| Downstream Genes | LOC_Os12g34890 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1858a osa-miR1858b |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g11210.1 |
| Rice Genome Annotation | LOC_Os11g11210.1 |
| Ricechip | LOC_Os11g11210.1 |
| KEGG | osa:9272724 dosa:Os11t0219000-01 |
| Entrez-Gene | 9272724 |