RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g12340.1 View Network Show in Genome Browser |
| Other Names | Os11g0229500 |
| Description | disease resistance protein RPM1, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 6878608-6884945 Nucleotide Length: 2706 |
| Protein-coding | LOC_Os11g12340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g52190 LOC_Os10g41330 LOC_Os11g11980 LOC_Os02g39140 LOC_Os04g47780 LOC_Os01g61460 LOC_Os08g29570 LOC_Os04g35130 LOC_Os07g18990 LOC_Os04g41229 LOC_Os05g34770 More.. |
| Downstream Genes | LOC_Os12g08810 LOC_Os11g29370 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g12340.1 |
| Rice Genome Annotation | LOC_Os11g12340.1 |
| Ricechip | LOC_Os11g12340.1 |
| KEGG | osa:4350133 dosa:Os11t0229500-01 |
| Entrez-Gene | 4350133 |