RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g12420.1 View Network Show in Genome Browser |
| Other Names | Os11g0230700 |
| Description | serpin domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 6925243-6927549 Nucleotide Length: 1575 |
| Protein-coding | LOC_Os11g12420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g22490 LOC_Os05g48310 LOC_Os05g48220 LOC_Os08g02410 LOC_Os07g10720 LOC_Os02g27760 LOC_Os03g18580 LOC_Os03g18570 LOC_Os07g12250 LOC_Os08g33920 LOC_Os08g06040 More.. |
| Downstream Genes | LOC_Os12g02730 LOC_Os12g03090 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR6249a osa-miR6249b osa-miR5809 osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g12420.1 |
| Rice Genome Annotation | LOC_Os11g12420.1 |
| Ricechip | LOC_Os11g12420.1 |
| KEGG | osa:9271001 dosa:Os11t0230700-00 |
| Entrez-Gene | 9271001 |