RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g13420.3 View Network Show in Genome Browser |
| Other Names | Os11g0237700 |
| Description | RNA binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 7346265-7348818 Nucleotide Length: 519 |
| Protein-coding | LOC_Os11g13420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g53890 LOC_Os03g04960 LOC_Os10g32570 LOC_Os09g38420 LOC_Os03g63740 LOC_Os01g68120 LOC_Os01g59510 LOC_Os03g04140 LOC_Os05g45710 LOC_Os01g52260 LOC_Os02g10830 More.. |
| Downstream Genes | LOC_Os11g16770 LOC_Os12g12850 LOC_Os12g01710 LOC_Os11g16590 LOC_Os12g07010 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g13420.3 |
| Rice Genome Annotation | LOC_Os11g13420.3 |
| Ricechip | LOC_Os11g13420.3 |
| KEGG | osa:4350155 dosa:Os11t0237700-01 |
| Entrez-Gene | 4350155 |