RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g13850.3 View Network Show in Genome Browser |
| Other Names | Os11g0242400 |
| Description | rieske domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 7639436-7642976 Nucleotide Length: 834 |
| Protein-coding | LOC_Os11g13850 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g50270 LOC_Os05g40180 LOC_Os01g71190 LOC_Os07g32880 LOC_Os01g13390 LOC_Os06g09610 LOC_Os03g61090 LOC_Os09g39180 LOC_Os07g01760 LOC_Os03g19760 LOC_Os03g17580 More.. |
| Downstream Genes | LOC_Os12g35630 LOC_Os12g23180 LOC_Os12g02340 LOC_Os12g02310 LOC_Os12g02330 LOC_Os12g03090 LOC_Os12g05430 LOC_Os11g41610 LOC_Os12g42980 LOC_Os12g18900 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g13850.3 |
| Rice Genome Annotation | LOC_Os11g13850.3 |
| Ricechip | LOC_Os11g13850.3 |
| KEGG | osa:4350172 dosa:Os11t0242400-01 |
| Entrez-Gene | 4350172 |