RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g13890.6 View Network Show in Genome Browser |
| Other Names | Os11g0242800 |
| Description | chlorophyll A-B binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 7659682-7662281 Nucleotide Length: 480 |
| Protein-coding | LOC_Os11g13890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g38410 LOC_Os07g05480 LOC_Os05g48630 LOC_Os04g33830 LOC_Os04g38600 LOC_Os07g37550 LOC_Os11g07020 LOC_Os02g51080 LOC_Os02g47020 LOC_Os08g33820 LOC_Os06g01210 More.. |
| Downstream Genes | LOC_Os12g07210 LOC_Os12g08770 LOC_Os11g47970 LOC_Os12g23200 LOC_Os12g19470 LOC_Os12g19381 LOC_Os12g17600 LOC_Os12g02340 LOC_Os12g02310 LOC_Os12g02330 LOC_Os12g34890 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g13890.6 |
| Rice Genome Annotation | LOC_Os11g13890.6 |
| Ricechip | LOC_Os11g13890.6 |
| KEGG | osa:4350176 dosa:Os11t0242800-01 |
| Entrez-Gene | 4350176 |