RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g16290.2 View Network Show in Genome Browser |
| Other Names | Os11g0264300 |
| Description | NIN, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 8970074-8977070 Nucleotide Length: 2577 |
| Protein-coding | LOC_Os11g16290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g37040 LOC_Os02g56480 LOC_Os01g04650 LOC_Os09g38390 LOC_Os09g04990 LOC_Os07g25680 LOC_Os06g08280 LOC_Os02g54510 LOC_Os02g51090 LOC_Os01g69900 LOC_Os06g07474 More.. |
| Downstream Genes | LOC_Os11g25780 LOC_Os12g07190 LOC_Os12g05080 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2931 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g16290.2 |
| Rice Genome Annotation | LOC_Os11g16290.2 |
| Ricechip | LOC_Os11g16290.2 |
| KEGG | osa:4350238 dosa:Os11t0264300-02 |
| Entrez-Gene | 4350238 |