RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g16410.3 View Network Show in Genome Browser |
| Other Names | Os11g0265400 |
| Description | oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 9073778-9078878 Nucleotide Length: 777 |
| Protein-coding | LOC_Os11g16410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g30760 LOC_Os08g36320 LOC_Os03g51080 LOC_Os04g52400 LOC_Os02g44500 LOC_Os05g25310 LOC_Os02g30060 LOC_Os07g10460 LOC_Os03g13300 LOC_Os01g73880 LOC_Os11g07930 More.. |
| Downstream Genes | LOC_Os11g18170 LOC_Os12g13930 LOC_Os11g24560 LOC_Os12g07110 LOC_Os11g24484 LOC_Os12g12580 LOC_Os12g12590 LOC_Os12g12470 LOC_Os12g12560 LOC_Os11g40690 LOC_Os12g12514 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g16410.3 |
| Rice Genome Annotation | LOC_Os11g16410.3 |
| Ricechip | LOC_Os11g16410.3 |
| KEGG | osa:4350245 dosa:Os11t0265400-01 |
| Entrez-Gene | 4350245 |