RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g16580.1 View Network Show in Genome Browser |
| Other Names | Os11g0267300 |
| Description | endonuclease III-like protein 1, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 9184903-9185890 Nucleotide Length: 1089 |
| Protein-coding | LOC_Os11g16580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g34750 LOC_Os06g04600 LOC_Os01g72880 LOC_Os05g50290 LOC_Os09g36530 LOC_Os05g49250 LOC_Os01g58680 LOC_Os02g34790 LOC_Os10g37490 LOC_Os01g71960 LOC_Os04g42290 More.. |
| Downstream Genes | LOC_Os12g10850 LOC_Os11g40150 LOC_Os12g31370 LOC_Os12g04980 LOC_Os11g19250 LOC_Os12g04220 LOC_Os12g43660 LOC_Os11g48090 LOC_Os11g47310 LOC_Os11g47180 LOC_Os11g29790 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g16580.1 |
| Rice Genome Annotation | LOC_Os11g16580.1 |
| Ricechip | LOC_Os11g16580.1 |
| KEGG | osa:9268162 dosa:Os11t0267300-01 |
| Entrez-Gene | 9268162 |