RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g20384.1 View Network Show in Genome Browser |
| Other Names | Os11g0309000 |
| Description | SacI homology domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 11783946-11784660 Nucleotide Length: 1794 |
| Protein-coding | LOC_Os11g20384 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g46720 LOC_Os01g08780 LOC_Os08g01750 LOC_Os01g50616 LOC_Os02g04020 LOC_Os03g60939 LOC_Os04g40730 LOC_Os01g51890 LOC_Os11g10420 LOC_Os02g48740 LOC_Os01g33080 More.. |
| Downstream Genes | LOC_Os12g32240 LOC_Os11g47760 LOC_Os12g01520 LOC_Os11g24484 LOC_Os11g48020 LOC_Os12g37560 LOC_Os12g02830 LOC_Os11g37080 LOC_Os12g18770 LOC_Os11g41890 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g20384.1 |
| Rice Genome Annotation | LOC_Os11g20384.1 |
| Ricechip | LOC_Os11g20384.1 |
| KEGG | osa:4350352 dosa:Os11t0309000-01 |
| Entrez-Gene | 4350352 |