RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g20689.1 View Network Show in Genome Browser |
| Other Names | Os11g0311300 |
| Description | exosome complex exonuclease, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 11976007-11977271 Nucleotide Length: 921 |
| Protein-coding | LOC_Os11g20689 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g63720 LOC_Os03g62720 LOC_Os08g02360 LOC_Os07g07310 LOC_Os03g06190 LOC_Os01g65220 LOC_Os09g07820 LOC_Os03g03710 LOC_Os02g42040 LOC_Os04g36810 LOC_Os02g34570 More.. |
| Downstream Genes | LOC_Os12g15420 LOC_Os12g21500 LOC_Os11g40140 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1850.2 osa-miR1869 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g20689.1 |
| Rice Genome Annotation | LOC_Os11g20689.1 |
| Ricechip | LOC_Os11g20689.1 |
| KEGG | osa:4350355 dosa:Os11t0311300-02 |
| Entrez-Gene | 4350355 |