RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g24540.2 View Network Show in Genome Browser |
| Other Names | Os11g0433200 |
| Description | signal peptide peptidase-like 2B, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 13986428-13988479 Nucleotide Length: 1605 |
| Protein-coding | LOC_Os11g24540 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16930 LOC_Os07g06560 LOC_Os03g07130 LOC_Os01g54010 LOC_Os08g01360 LOC_Os03g57410 LOC_Os01g53810 LOC_Os07g06540 LOC_Os01g53800 LOC_Os01g53500 LOC_Os05g45060 More.. |
| Downstream Genes | LOC_Os12g04130 LOC_Os12g42540 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5788 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g24540.2 |
| Rice Genome Annotation | LOC_Os11g24540.2 |
| Ricechip | LOC_Os11g24540.2 |
| KEGG | osa:4350402 dosa:Os11t0433200-02 |
| Entrez-Gene | 4350402 |