RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g25100.1 View Network Show in Genome Browser |
| Other Names | Os11g0438000 |
| Description | tropinone reductase, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 14301952-14302464 Nucleotide Length: 312 |
| Protein-coding | LOC_Os11g25100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18590 LOC_Os04g36800 LOC_Os06g09630 LOC_Os02g10320 LOC_Os07g42420 LOC_Os03g22950 |
| Downstream Genes | LOC_Os12g34890 LOC_Os11g31900 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g25100.1 |
| Rice Genome Annotation | LOC_Os11g25100.1 |
| Ricechip | LOC_Os11g25100.1 |
| KEGG | osa:4350414 dosa:Os11t0438000-02 |
| Entrez-Gene | 4350414 |