RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g25454.1 View Network Show in Genome Browser |
| Other Names | Os11g0441500 |
| Description | cytokinin-N-glucosyltransferase 1, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 14501180-14501931 Nucleotide Length: 1437 |
| Protein-coding | LOC_Os11g25454 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g40030 LOC_Os10g16974 LOC_Os09g26940 LOC_Os09g08990 LOC_Os02g36190 LOC_Os02g32770 LOC_Os01g50490 LOC_Os02g36150 LOC_Os09g26960 LOC_Os09g26980 LOC_Os08g35510 More.. |
| Downstream Genes | LOC_Os11g40150 LOC_Os12g04980 LOC_Os12g31370 LOC_Os11g41680 LOC_Os11g41710 LOC_Os12g44290 LOC_Os12g16720 LOC_Os12g05040 LOC_Os12g32850 LOC_Os11g27730 LOC_Os12g39300 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00908 |
| Metacyc Pathways | PWY-2902 PWY-2901 PWY-2881 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g25454.1 |
| Rice Genome Annotation | LOC_Os11g25454.1 |
| Ricechip | LOC_Os11g25454.1 |
| KEGG | osa:4350423 dosa:Os11t0441500-01 |
| Entrez-Gene | 4350423 |