RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g28340.2 View Network Show in Genome Browser |
| Other Names | Os11g0473000 |
| Description | ER lumen protein retaining receptor, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 16305696-16309500 Nucleotide Length: 462 |
| Protein-coding | LOC_Os11g28340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0004872 | receptor activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g07280 LOC_Os03g17020 LOC_Os01g17430 LOC_Os05g41060 LOC_Os01g59790 LOC_Os03g59740 LOC_Os01g16030 LOC_Os01g04280 LOC_Os01g68320 LOC_Os07g12200 LOC_Os07g12170 More.. |
| Downstream Genes | LOC_Os11g48020 LOC_Os12g36950 LOC_Os12g30060 LOC_Os11g36050 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g28340.2 |
| Rice Genome Annotation | LOC_Os11g28340.2 |
| Ricechip | LOC_Os11g28340.2 |
| KEGG | osa:4350496 dosa:Os11t0473000-01 |
| Entrez-Gene | 4350496 |