RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g28980.1 View Network Show in Genome Browser |
| Other Names | Os11g0479232 |
| Description | GPI transamidase component Gpi16 subunit family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 16762419-16764041 Nucleotide Length: 1938 |
| Protein-coding | LOC_Os11g28980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g48980 LOC_Os02g12740 LOC_Os01g67960 LOC_Os02g46350 LOC_Os06g16420 LOC_Os02g09810 LOC_Os11g05562 LOC_Os08g44480 LOC_Os10g08940 LOC_Os09g39540 LOC_Os06g42720 More.. |
| Downstream Genes | LOC_Os11g34360 LOC_Os11g32240 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g28980.1 |
| Rice Genome Annotation | LOC_Os11g28980.1 |
| Ricechip | LOC_Os11g28980.1 |
| KEGG | osa:9271607 dosa:Os11t0479232-01 |
| Entrez-Gene | 9271607 |