RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g29340.1 View Network Show in Genome Browser |
| Other Names | Os11g0483600 |
| Description | SAP domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 17008055-17008510 Nucleotide Length: 558 |
| Protein-coding | LOC_Os11g29340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g42760 LOC_Os10g32540 LOC_Os03g26630 LOC_Os01g24940 LOC_Os07g08729 LOC_Os05g03430 LOC_Os09g37760 LOC_Os01g35040 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g29340.1 |
| Rice Genome Annotation | LOC_Os11g29340.1 |
| Ricechip | LOC_Os11g29340.1 |
| KEGG | osa:4350522 dosa:Os11t0483600-01 |
| Entrez-Gene | 4350522 |