RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g29370.1 View Network Show in Genome Browser |
| Other Names | Os11g0484000 |
| Description | haloacid dehalogenase-like hydrolase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 17032753-17034236 Nucleotide Length: 1557 |
| Protein-coding | LOC_Os11g29370 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os10g28350 LOC_Os03g06620 LOC_Os11g04020 LOC_Os10g28360 LOC_Os04g27830 LOC_Os01g01120 LOC_Os01g46932 LOC_Os02g48390 LOC_Os01g68950 LOC_Os01g68940 LOC_Os05g41990 More.. |
| Downstream Genes | LOC_Os12g38270 LOC_Os12g31620 LOC_Os12g07720 LOC_Os12g38570 LOC_Os12g14330 LOC_Os11g35580 LOC_Os11g45330 LOC_Os12g31380 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2868 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00270 |
| Metacyc Pathways | PWY-181 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g29370.1 |
| Rice Genome Annotation | LOC_Os11g29370.1 |
| Ricechip | LOC_Os11g29370.1 |
| KEGG | osa:4350524 dosa:Os11t0484000-01 |
| Entrez-Gene | 4350524 |