RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g29390.1 View Network Show in Genome Browser |
| Other Names | Os11g0484400 |
| Description | bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 17046948-17052915 Nucleotide Length: 1566 |
| Protein-coding | LOC_Os11g29390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g46270 LOC_Os07g44630 LOC_Os10g34750 LOC_Os02g55410 LOC_Os11g29380 LOC_Os01g64820 LOC_Os05g39850 LOC_Os02g33430 LOC_Os02g56130 LOC_Os02g43920 LOC_Os01g55974 More.. |
| Downstream Genes | LOC_Os12g06200 LOC_Os12g05810 LOC_Os12g35030 LOC_Os11g40150 LOC_Os12g37400 LOC_Os12g31810 LOC_Os12g31370 LOC_Os12g39210 LOC_Os12g41250 LOC_Os12g07720 LOC_Os12g07010 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn00670 rn01100 rn00790 |
| Metacyc Pathways | PWY0-166 1CMET2-PWY P1-PWY PWY-3841 FOLSYN-PWY PWY-3742 PWY-6614 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g29390.1 |
| Rice Genome Annotation | LOC_Os11g29390.1 |
| Ricechip | LOC_Os11g29390.1 |
| KEGG | osa:4350527 dosa:Os11t0484400-01 |
| Entrez-Gene | 4350527 |