RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g29870.1 View Network Show in Genome Browser |
| Other Names | Os11g0490900 |
| Description | WRKY72, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 17337056-17337820 Nucleotide Length: 729 |
| Protein-coding | LOC_Os11g29870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0009991 | response to extracellular stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g52390 LOC_Os09g30414 LOC_Os06g07200 LOC_Os10g39680 LOC_Os05g37190 LOC_Os01g22352 LOC_Os09g39960 LOC_Os07g36800 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Reference | |
|---|---|
| PubMed | 15618416 20826955 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g29870.1 |
| Rice Genome Annotation | LOC_Os11g29870.1 |
| Ricechip | LOC_Os11g29870.1 |
| KEGG | osa:4350545 dosa:Os11t0490900-01 |
| Entrez-Gene | 4350545 |