RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g30500.1 View Network Show in Genome Browser |
| Other Names | Os11g0498600 |
| Description | HVA22, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 17722080-17725442 Nucleotide Length: 459 |
| Protein-coding | LOC_Os11g30500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g27850 LOC_Os10g37660 LOC_Os01g12580 LOC_Os01g39310 LOC_Os03g17990 LOC_Os01g05670 LOC_Os03g56800 LOC_Os06g41590 LOC_Os07g41600 LOC_Os04g08320 LOC_Os08g05790 More.. |
| Downstream Genes | LOC_Os12g41170 LOC_Os11g37260 LOC_Os12g07450 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g30500.1 |
| Rice Genome Annotation | LOC_Os11g30500.1 |
| Ricechip | LOC_Os11g30500.1 |
| KEGG | osa:4350556 dosa:Os11t0498600-01 |
| Entrez-Gene | 4350556 |