RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os11g31640.1 View Network Show in Genome Browser
Other Names	Os11g0516000
Description	serine palmitoyltransferase 2, putative, expressed
Gene Attributes	Chromosome: Chr11 CDS Coordinates (5'-3'): 18495868-18497878 Nucleotide Length: 1467
Protein-coding	LOC_Os11g31640

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006629	lipid metabolic	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0016740	transferase activity	Molecular Function	IEA
GO:0005783	endoplasmic reticulum	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005773	vacuole	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os10g11200 LOC_Os02g56300 LOC_Os03g14800 LOC_Os02g47940 LOC_Os08g43190 LOC_Os07g42600 LOC_Os07g01760 LOC_Os04g48850 LOC_Os01g09700 LOC_Os03g51740 LOC_Os06g03990 More..
Downstream Genes	LOC_Os12g15590 LOC_Os11g48090 LOC_Os11g35040 LOC_Os11g42510 LOC_Os12g18770 LOC_Os12g43363

Pathways
KEGG Pathways	rn00600 rn01100 rn00780
Metacyc Pathways	SPHINGOLIPID-SYN-PWY PWY-3701 BIOTIN-SYNTHESIS-PWY

Database Links
Gramene	LOC_Os11g31640.1
Rice Genome Annotation	LOC_Os11g31640.1
Ricechip	LOC_Os11g31640.1
KEGG	osa:4350591 dosa:Os11t0516000-01
Entrez-Gene	4350591