RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g32290.1 View Network Show in Genome Browser |
| Other Names | Os11g0525900 |
| Description | 3-5 exonuclease eri-1, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 19076279-19079312 Nucleotide Length: 960 |
| Protein-coding | LOC_Os11g32290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g28980 LOC_Os03g18940 LOC_Os02g26660 LOC_Os04g53200 LOC_Os04g23830 LOC_Os03g02970 |
| Downstream Genes | LOC_Os12g08740 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 osa-miR2925 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g32290.1 |
| Rice Genome Annotation | LOC_Os11g32290.1 |
| Ricechip | LOC_Os11g32290.1 |
| KEGG | osa:4350620 dosa:Os11t0525900-00 |
| Entrez-Gene | 4350620 |