RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g32900.2 View Network Show in Genome Browser |
| Other Names | Os11g0533500 |
| Description | retinoblastoma-related protein-like, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 19433454-19439903 Nucleotide Length: 2622 |
| Protein-coding | LOC_Os11g32900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g05760 LOC_Os03g43890 LOC_Os06g38470 LOC_Os02g43920 LOC_Os01g74146 LOC_Os01g55580 LOC_Os07g07240 LOC_Os03g57790 LOC_Os05g08960 LOC_Os10g30420 LOC_Os03g54091 More.. |
| Downstream Genes | LOC_Os12g06200 LOC_Os12g07730 LOC_Os12g44390 LOC_Os12g41220 LOC_Os12g37400 LOC_Os12g39210 LOC_Os12g31810 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g32900.2 |
| Rice Genome Annotation | LOC_Os11g32900.2 |
| Ricechip | LOC_Os11g32900.2 |
| KEGG | osa:4350648 dosa:Os11t0533500-01 |
| Entrez-Gene | 4350648 |