RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g34270.1 View Network Show in Genome Browser |
| Other Names | Os11g0545300 |
| Description | ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 20059849-20060367 Nucleotide Length: 1503 |
| Protein-coding | LOC_Os11g34270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g10770 LOC_Os05g37350 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5543 |
| Reference | |
|---|---|
| PubMed | 21637817 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g34270.1 |
| Rice Genome Annotation | LOC_Os11g34270.1 |
| Ricechip | LOC_Os11g34270.1 |
| KEGG | osa:4350688 dosa:Os11t0545300-01 |
| Entrez-Gene | 4350688 |