RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g34720.1 View Network Show in Genome Browser |
| Other Names | Os11g0549620 |
| Description | Ser/Thr protein phosphatase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 20336764-20340697 Nucleotide Length: 993 |
| Protein-coding | LOC_Os11g34720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g48840 LOC_Os07g02090 LOC_Os03g15430 LOC_Os02g16550 LOC_Os03g27950 LOC_Os09g11230 LOC_Os06g37660 LOC_Os03g16110 LOC_Os01g49690 LOC_Os02g12580 LOC_Os05g11550 More.. |
| Downstream Genes | LOC_Os12g38770 LOC_Os12g38760 LOC_Os12g38750 |
| Pathways | |
|---|---|
| Metacyc Pathways | NADBIOSYNTHESISII |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g34720.1 |
| Rice Genome Annotation | LOC_Os11g34720.1 |
| Ricechip | LOC_Os11g34720.1 |
| KEGG | osa:9266367 dosa:Os11t0549620-01 |
| Entrez-Gene | 9266367 |