RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g34860.1 View Network Show in Genome Browser |
| Other Names | Os11g0549700 |
| Description | palmitoyltransferase TIP1, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 20420003-20424116 Nucleotide Length: 1656 |
| Protein-coding | LOC_Os11g34860 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g58960 LOC_Os03g24900 LOC_Os03g46650 LOC_Os09g33450 LOC_Os08g42620 LOC_Os03g17020 LOC_Os08g42370 LOC_Os01g70100 LOC_Os05g26890 LOC_Os02g08270 LOC_Os03g18550 More.. |
| Downstream Genes | LOC_Os12g40780 LOC_Os12g40770 LOC_Os12g03730 LOC_Os12g42850 LOC_Os12g18770 LOC_Os12g43940 LOC_Os12g43840 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g34860.1 |
| Rice Genome Annotation | LOC_Os11g34860.1 |
| Ricechip | LOC_Os11g34860.1 |
| KEGG | osa:4350702 dosa:Os11t0549700-01 |
| Entrez-Gene | 4350702 |