RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g34940.1 View Network Show in Genome Browser |
| Other Names | Os11g0550800 |
| Description | plastid-specific 50S ribosomal protein 6, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 20466689-20470502 Nucleotide Length: 384 |
| Protein-coding | LOC_Os11g34940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g38750 LOC_Os01g59060 LOC_Os02g04460 LOC_Os06g43900 LOC_Os01g69950 LOC_Os02g38210 LOC_Os09g10760 LOC_Os03g15870 LOC_Os03g10060 LOC_Os09g39180 LOC_Os02g53770 More.. |
| Downstream Genes | LOC_Os12g34890 LOC_Os12g37710 LOC_Os11g37130 LOC_Os11g48040 LOC_Os12g43340 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g34940.1 |
| Rice Genome Annotation | LOC_Os11g34940.1 |
| Ricechip | LOC_Os11g34940.1 |
| KEGG | osa:4350706 dosa:Os11t0550800-01 |
| Entrez-Gene | 4350706 |