RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g35390.1 View Network Show in Genome Browser |
| Other Names | Os11g0558200 |
| Description | MYB family transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 20733795-20734352 Nucleotide Length: 993 |
| Protein-coding | LOC_Os11g35390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g63940 LOC_Os02g06592 LOC_Os02g56020 LOC_Os02g47150 LOC_Os02g35100 LOC_Os05g05780 LOC_Os04g01970 LOC_Os03g18410 LOC_Os05g46330 LOC_Os04g28090 LOC_Os03g62379 More.. |
| Downstream Genes | LOC_Os12g34510 LOC_Os12g44150 LOC_Os12g37370 LOC_Os12g09540 LOC_Os12g25120 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g35390.1 |
| Rice Genome Annotation | LOC_Os11g35390.1 |
| Ricechip | LOC_Os11g35390.1 |
| KEGG | osa:4350727 dosa:Os11t0558200-01 |
| Entrez-Gene | 4350727 |