RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g35500.1 View Network Show in Genome Browser |
| Other Names | Os11g0559200 |
| Description | receptor-like protein kinase 5 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 20796674-20799439 Nucleotide Length: 2997 |
| Protein-coding | LOC_Os11g35500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os06g33549 LOC_Os06g48300 LOC_Os02g55560 LOC_Os04g56450 LOC_Os04g37904 LOC_Os06g33530 LOC_Os07g32380 LOC_Os02g15594 LOC_Os04g52000 LOC_Os10g39540 More.. |
| Downstream Genes | LOC_Os11g41860 LOC_Os12g33100 LOC_Os11g47160 LOC_Os11g36160 LOC_Os11g36200 LOC_Os11g36150 LOC_Os12g08180 LOC_Os11g36180 LOC_Os11g35840 LOC_Os12g03070 LOC_Os11g36190 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5504 |
| Reference | |
|---|---|
| PubMed | 8525370 19892983 20385831 22735448 21076626 1362973 20616165 21324061 9596635 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g35500.1 |
| Rice Genome Annotation | LOC_Os11g35500.1 |
| Ricechip | LOC_Os11g35500.1 |
| KEGG | osa:9271075 dosa:Os11t0559200-00 |
| Entrez-Gene | 9271075 |