RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g37100.1 View Network Show in Genome Browser |
| Other Names | Os11g0580000 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 21892581-21897269 Nucleotide Length: 1869 |
| Protein-coding | LOC_Os11g37100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g46920 LOC_Os02g15810 LOC_Os08g44420 LOC_Os08g44410 LOC_Os09g38710 LOC_Os01g70560 LOC_Os11g02740 LOC_Os01g54420 LOC_Os01g67110 LOC_Os01g55220 LOC_Os04g47580 More.. |
| Downstream Genes | LOC_Os12g02710 LOC_Os12g31810 LOC_Os12g34840 LOC_Os12g38140 LOC_Os12g17530 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR444a-3p.1 osa-miR444d.1 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g37100.1 |
| Rice Genome Annotation | LOC_Os11g37100.1 |
| Ricechip | LOC_Os11g37100.1 |
| KEGG | osa:4350784 dosa:Os11t0580000-01 |
| Entrez-Gene | 4350784 |