RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g38260.1 View Network Show in Genome Browser |
| Other Names | Os11g0595200 |
| Description | PAP fibrillin family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 22658414-22660215 Nucleotide Length: 813 |
| Protein-coding | LOC_Os11g38260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os10g42500 LOC_Os09g04790 LOC_Os07g28790 LOC_Os04g51792 LOC_Os06g39240 LOC_Os02g54130 LOC_Os05g01950 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g38260.1 |
| Rice Genome Annotation | LOC_Os11g38260.1 |
| Ricechip | LOC_Os11g38260.1 |
| KEGG | osa:4350844 dosa:Os11t0595200-01 |
| Entrez-Gene | 4350844 |