RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g38810.2 View Network Show in Genome Browser |
| Other Names | Os11g0600900 |
| Description | mannose-6-phosphate isomerase, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 23077519-23081682 Nucleotide Length: 849 |
| Protein-coding | LOC_Os11g38810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g38980 LOC_Os05g28750 LOC_Os01g19840 LOC_Os02g44690 LOC_Os06g07120 LOC_Os09g39500 LOC_Os07g16960 LOC_Os03g13170 LOC_Os07g41680 LOC_Os05g38520 LOC_Os01g62350 More.. |
| Downstream Genes | LOC_Os12g13320 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5487 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g38810.2 |
| Rice Genome Annotation | LOC_Os11g38810.2 |
| Ricechip | LOC_Os11g38810.2 |
| KEGG | osa:4350861 dosa:Os11t0600900-01 |
| Entrez-Gene | 4350861 |