RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g38900.1 View Network Show in Genome Browser |
| Other Names | Os11g0602200 |
| Description | histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 23148903-23154656 Nucleotide Length: 2442 |
| Protein-coding | LOC_Os11g38900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g07960 LOC_Os04g25550 LOC_Os05g04330 LOC_Os06g40200 LOC_Os04g42600 LOC_Os04g56980 LOC_Os08g25799 LOC_Os01g36860 LOC_Os11g34230 LOC_Os06g47320 LOC_Os03g11720 More.. |
| Downstream Genes | LOC_Os12g05090 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g38900.1 |
| Rice Genome Annotation | LOC_Os11g38900.1 |
| Ricechip | LOC_Os11g38900.1 |
| KEGG | osa:4350865 dosa:Os11t0602200-01 |
| Entrez-Gene | 4350865 |