RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g38930.1 View Network Show in Genome Browser |
| Other Names | Os11g0602400 |
| Description | tRNA-splicing endonuclease subunit Sen2, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 23171897-23176348 Nucleotide Length: 879 |
| Protein-coding | LOC_Os11g38930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g35070 LOC_Os04g59370 LOC_Os04g39060 LOC_Os05g29920 LOC_Os03g19280 LOC_Os02g56020 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g38930.1 |
| Rice Genome Annotation | LOC_Os11g38930.1 |
| Ricechip | LOC_Os11g38930.1 |
| KEGG | osa:4350867 dosa:Os11t0602400-01 |
| Entrez-Gene | 4350867 |