RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g39140.1 View Network Show in Genome Browser |
| Other Names | Os11g0604700 |
| Description | thioredoxin domain-containing protein 9, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 23291054-23294563 Nucleotide Length: 693 |
| Protein-coding | LOC_Os11g39140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g46650 LOC_Os11g09280 LOC_Os09g27830 LOC_Os10g35720 LOC_Os10g34520 LOC_Os07g10256 LOC_Os02g34940 LOC_Os04g35600 LOC_Os11g14220 LOC_Os03g51600 LOC_Os03g43020 More.. |
| Downstream Genes | LOC_Os12g37590 LOC_Os11g42160 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g39140.1 |
| Rice Genome Annotation | LOC_Os11g39140.1 |
| Ricechip | LOC_Os11g39140.1 |
| KEGG | osa:4350878 dosa:Os11t0604700-00 |
| Entrez-Gene | 4350878 |