RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g39220.1 View Network Show in Genome Browser |
| Other Names | Os11g0605500 |
| Description | acyl-coenzyme A oxidase, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 23346654-23348579 Nucleotide Length: 2100 |
| Protein-coding | LOC_Os11g39220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005777 | peroxisome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g07830 LOC_Os07g09060 LOC_Os02g43710 LOC_Os06g39344 |
| Downstream Genes | LOC_Os12g16350 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00410 rn00071 rn01100 rn00592 rn01040 |
| Metacyc Pathways | FAO-PWY PROPFERM-PWY PWY-3941 PWY-5136 |
| Reference | |
|---|---|
| PubMed | 17000027 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g39220.1 |
| Rice Genome Annotation | LOC_Os11g39220.1 |
| Ricechip | LOC_Os11g39220.1 |
| KEGG | osa:4350881 dosa:Os11t0605500-01 |
| Entrez-Gene | 4350881 |