RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g40090.1 View Network Show in Genome Browser |
| Other Names | Os11g0615100 |
| Description | A49-like RNA polymerase I associated factor family protein, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 23902612-23909194 Nucleotide Length: 1455 |
| Protein-coding | LOC_Os11g40090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g58090 LOC_Os11g13694 LOC_Os06g08770 LOC_Os01g51390 LOC_Os09g25960 LOC_Os06g05740 LOC_Os09g25990 LOC_Os02g52700 LOC_Os09g26000 LOC_Os02g52710 LOC_Os04g54440 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g40090.1 |
| Rice Genome Annotation | LOC_Os11g40090.1 |
| Ricechip | LOC_Os11g40090.1 |
| KEGG | osa:4350918 dosa:Os11t0615100-01 |
| Entrez-Gene | 4350918 |