RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g40150.1 View Network Show in Genome Browser |
| Other Names | Os11g0615800 |
| Description | DNA repair protein Rad51, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 23938187-23942544 Nucleotide Length: 1020 |
| Protein-coding | LOC_Os11g40150 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g52510 LOC_Os04g57230 LOC_Os10g10244 LOC_Os11g04954 LOC_Os07g15440 LOC_Os02g53680 LOC_Os03g54091 LOC_Os05g43610 LOC_Os06g13660 LOC_Os04g54340 LOC_Os03g06900 More.. |
| Downstream Genes | LOC_Os12g04980 LOC_Os12g19370 LOC_Os11g44910 LOC_Os12g03130 LOC_Os12g07720 LOC_Os12g10850 LOC_Os12g31810 LOC_Os12g37510 LOC_Os12g10910 LOC_Os12g39210 LOC_Os12g26060 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g40150.1 |
| Rice Genome Annotation | LOC_Os11g40150.1 |
| Ricechip | LOC_Os11g40150.1 |
| KEGG | osa:4350923 dosa:Os11t0615800-00 |
| Entrez-Gene | 4350923 |