RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g41180.1 View Network Show in Genome Browser |
| Other Names | Os11g0629900 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 24670967-24674338 Nucleotide Length: 2403 |
| Protein-coding | LOC_Os11g41180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os11g17600 LOC_Os05g19270 LOC_Os01g27040 LOC_Os06g22080 LOC_Os02g48350 LOC_Os08g02130 LOC_Os09g24210 LOC_Os03g42750 LOC_Os04g54340 LOC_Os01g59120 LOC_Os04g45040 More.. |
| Downstream Genes | LOC_Os12g37400 LOC_Os12g20324 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g41180.1 |
| Rice Genome Annotation | LOC_Os11g41180.1 |
| Ricechip | LOC_Os11g41180.1 |
| KEGG | dosa:Os11t0629900-00 |