RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g41820.1 View Network Show in Genome Browser |
| Other Names | Os11g0636900 |
| Description | RNA recognition motif containing protein, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 25113284-25113493 Nucleotide Length: 1725 |
| Protein-coding | LOC_Os11g41820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g48960 LOC_Os08g01070 LOC_Os07g47630 LOC_Os02g52140 LOC_Os01g72890 LOC_Os01g36570 LOC_Os02g05310 LOC_Os07g07610 LOC_Os09g31482 LOC_Os03g22380 LOC_Os03g44484 More.. |
| Downstream Genes | LOC_Os12g44390 LOC_Os12g37370 LOC_Os12g18880 LOC_Os11g43620 LOC_Os12g01390 LOC_Os12g43600 LOC_Os12g04180 LOC_Os12g03710 LOC_Os12g38430 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g41820.1 |
| Rice Genome Annotation | LOC_Os11g41820.1 |
| Ricechip | LOC_Os11g41820.1 |
| KEGG | osa:4350981 dosa:Os11t0636900-02 |
| Entrez-Gene | 4350981 |