RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os11g41910.1 View Network Show in Genome Browser |
| Other Names | Os11g0638000 |
| Description | GTP-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr11 CDS Coordinates (5'-3'): 25199831-25206038 Nucleotide Length: 1035 |
| Protein-coding | LOC_Os11g41910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g13000 LOC_Os05g35540 LOC_Os07g30800 LOC_Os11g05552 LOC_Os07g38300 LOC_Os02g02390 LOC_Os11g37130 LOC_Os03g51840 LOC_Os03g52640 LOC_Os01g67570 LOC_Os07g47300 More.. |
| Downstream Genes | LOC_Os12g42370 LOC_Os11g47800 LOC_Os12g09570 LOC_Os12g36194 LOC_Os12g29990 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5825 |
| Database Links | |
|---|---|
| Gramene | LOC_Os11g41910.1 |
| Rice Genome Annotation | LOC_Os11g41910.1 |
| Ricechip | LOC_Os11g41910.1 |
| KEGG | osa:4350988 dosa:Os11t0638000-01 |
| Entrez-Gene | 4350988 |